VaxiOmics™ — a multi-omics service brand of VAXICAN

Next-Gen Multiomics Services

One of the few centres in Central and Eastern Europe combining Oxford Nanopore long-read sequencing with Element Biosciences AVITI24 short-read and spatial multi-omics — under one roof, with full bioinformatics support, from a single sample to a complete research program.

Certified Service Provider

About VaxiOmics

A Gdańsk-Based Multiomics Powerhouse

VaxiOmics™ is the sequencing and multi-omics service brand of VAXICAN Sp. z o.o., a Gdańsk-based biotech built by an academic team with a delivery track record for research institutes, universities, clinical units and industry.

We are the Certified Service Provider of Oxford Nanopore Technologies in Poland and one of the few centres in Central and Eastern Europe to combine long-read (ONT) and short-read (Element Biosciences AVITI24) sequencing with spatial multi-omics under one roof.

We work as a research partner — from experimental design, through extraction, QC and library preparation, to interpreted, publication-ready results. Raw data are held in a secure, multi-year archive aligned with funder requirements (NCN, ABM, EU).

10 kb+ long reads for complete de novo genomes
2 sequencing platforms — long-read + short-read/spatial
Q40 avidity sequencing accuracy class
Multi-year secure data archive, funder-aligned

Projects delivered for research and clinical partners including

  • NIZP‑PZH
  • GUMed / UCK
  • SGGW

Our Platforms

Two Technologies, One Integrated Workflow

We combine long-read and short-read sequencing to capture the full molecular picture — from structural variants and native epigenetic marks to single-cell spatial resolution.

Certified Service Provider

Long-read sequencing, native and unbiased

  • Reads >10 kb for complete de novo genomes, repeats and structural variants
  • Native 5mC methylation with every genome
  • Full-length transcripts for isoforms and splice variants
  • Native m6A from direct RNA sequencing
  • Full-length 16S (V1–V9) with species-level resolution
AVITI24 Platform

Short-read, high-accuracy and spatial multi-omics

  • Q40-class avidity sequencing for low-frequency variant calls
  • WGS and RNA-seq at scale, from 2×75 to 2×300 bp
  • Same-cell multiomics: 350-gene RNA panel, 50-protein panel, subcellular resolution
  • In situ sequencing directly in the cell — from CRISPR screens to expressed mutations

Native 5mC and m6A detection run alongside sequencing — no DNA-degrading bisulfite conversion required, so epigenetics and epitranscriptomics come at no extra cost to your project.

Scope of Services

From a Single Sample to a Full Multi-Omic Program

WGS Sequencing

Long and short reads

Microbiome & Metagenome

16S/ITS, shotgun, virome

5mC Epigenomics

Native, bisulfite-free

Transcriptomics

Full-length RNA-seq

m6A Epitranscriptomics

Native RNA

Multi-omic Programs

Strain / line selection

Bioinformatics & AI/ML

From FASTQ to classifier

2026 Novelty

Spatial Multi-omics

Subcellular resolution, same-cell RNA + protein

Why VaxiOmics

Why Research Teams Choose Us

Six reasons VaxiOmics stands apart from a typical sequencing core facility.

CEE Advantage

One-of-a-Kind Platform Stack

Long-read ONT, two short-read platforms, spatial multi-omics and cell screening — combined with a cell-culture lab, in a single organization. Few providers in Poland and the CEE region offer this integrated model.

Included as Standard

Epigenetics at No Extra Cost

Native 5mC and m6A detection run alongside sequencing — no DNA-degrading bisulfite conversion required. Epigenetics and epitranscriptomics come standard, not as a costly add-on.

Track Record

A Scientific Team, Not Just a Service

Projects delivered for NIZP-PZH, GUMed/UCK and SGGW — complete with biological interpretation, not just raw data hand-off.

Rare Service

Conceptual & Experimental Advisory

We co-create the research project from scratch: methodology, scope of experiments, and delivery of the full set of required analyses.

Unique Integration

Bioinformatics as Hypothesis Confirmation

Our real value lies in the depth of data integration — genome × methylome × transcriptome × epitranscriptome × your phenotypic data.

Real Rare Value

Long-Term, Funder-Aligned Data Archive

Unlike a typical core facility that keeps FASTQ files available only briefly, VaxiOmics includes an agreed, multi-year retention period aligned with NCN, ABM and EU funder requirements.

Get in Touch

Let's Design Your Multiomics Project

Free technical consultation — we'll match the platform and scope of analysis to your research goal, whether it's a single service, a public tender, or a multi-year research program.

VAXICAN Sp. z o.o.

Kampinoska 25
80-180 Gdańsk, Poland

NIP 5833373590

www.vaxiomics.bio

info@vaxiomics.bio

+48 727 678 621

Tomasz Lepionka, PhD

Multi-Omics Commercial & Operations Manager

tomasz.lepionka@vaxican.com

+48 727 678 621

By submitting, you agree that VAXICAN Sp. z o.o. may contact you about your inquiry.